Handle the unresolved issues wiki list for the Protocol

Try to handle the points listen in the Unresolved Issues - Protocol and Unresolved Issues - Architecture pages by:

• Delete the bullet because the issue has already been decided on and documented
• Decide on the issue based an the knowledge gained since the issue was written.
• Create a JIRA issue.

Some of the issues listen might not be so easy to handle, and they then have to remain on the unresolved list.